I got this probleme with my ruby game I think its a berry glithch. any way I realize that some of my pokemons are missing. anyone knows whats wrong[/i]

Have you been using an AR or the cloning glitch? Sometimes they delete your pokemon.

yeah I have used the AR. but not to clone. to get the legandaries.

if u use AR, sometimes it deletes ur pokemon...........it once happened to my friend

What exactly is the berry glitch? I bought my ruby version used and the clock doesn't work on it. What did someone do to the game before I got it?

That is the berry glitch; the clock stops working after a while in R/S. You need to mix records (I think) with LG, FR, or E to fix it. There should be details on the main site, in the Hoenn section somewhere.