I was on Youtube one day and found a very good theory for a Zelda Timeline.
Here's the video:
http://www.youtube.com/watch?v=RXN1BF65WjI
It's almost all logical...except for the Twilight Princess part. I assume the video was made before TP, and Phantom Hourglass, were realeased. Anyone who has played TP from beggining to end knows that it didn't end with all of Hyrule being flooded therfore not giving birth to Wind Waker. TP was a pretty new kind of Zelda, kind of like WW. I don't really know where I'd put TP on the timeline.
There's also Orcale of Ages & Oracle of Seasons. I haven't actually played these games, so I have no idea how they end or which Hyrule they should be in. Like said in the timeline they probably take place at the same times, and in different timelines.
So I guess this could be a Zelda Timeline discussion thread.